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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7900810 chr10:46083933 C/T AGAP7 chr10:51464162-51486327:- 0.37 6.57 1.35E-10 Box Plot
THCA rs7902594 chr10:51822692 G/C FAM21B chr10:47894023-47949412:+ 0.58 7.62 1.38E-13 Box Plot
THCA rs7903456 chr10:88919319 C/T FAM35B chr10:46897641-46939143:+ 0.37 7.23 1.87E-12 Box Plot
THCA rs7905304 chr10:51820107 C/T FAM21B chr10:47894023-47949412:+ 0.61 7.89 2.02E-14 Box Plot
THCA rs7905974 chr10:51820627 C/T FAM21B chr10:47894023-47949412:+ 0.58 7.62 1.38E-13 Box Plot
THCA rs7906068 chr10:51825013 T/C FAM21B chr10:47894023-47949412:+ 0.58 7.62 1.38E-13 Box Plot
THCA rs7906533 chr10:45831939 A/G AGAP8 chr10:51224681-51371321:- -0.45 -6.15 1.63E-9 Box Plot
THCA rs79071692 chr2:113282243 A/G RGPD5 chr2:110550335-110615272:+ -0.5 -7.03 7.01E-12 Box Plot
THCA rs79078390 chr14:66700710 G/GA ATP6V1D chr14:67761088-67826982:- 0.42 7.28 1.36E-12 Box Plot
THCA rs7909375 chr10:72322782 G/A TTC22 chr1:55245385-55266940:- 0.44 5.98 4.42E-9 Box Plot
THCA rs79115110 chr12:94805735 C/T C6orf176 chr6:166337536-166401527:- -0.54 -6.08 2.41E-9 Box Plot
THCA rs79125437 chr11:3377262 G/A LAMA4 chr6:112429963-112576141:- 0.33 6.36 4.85E-10 Box Plot
THCA rs79133810 chr2:132191887 A/G CCDC74B chr2:130896860-130902707:- 0.36 6.57 1.35E-10 Box Plot
THCA rs79145479 chr6:151778653 T/C NEK5 chr13:52607747-52703214:- 0.62 7.22 2.01E-12 Box Plot
THCA rs7915651 chr10:51820260 T/C FAM21B chr10:47894023-47949412:+ 0.61 7.89 2.02E-14 Box Plot